Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
GdnfP48540 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.59□□□□□ -0.55
GdnfP48540 Gm27306-201ENSMUST00000183970 107 ntBASIC11.59□□□□□ -0.55
GdnfP48540 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.59□□□□□ -0.55
GdnfP48540 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
GdnfP48540 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
GdnfP48540 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
GdnfP48540 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
GdnfP48540 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
GdnfP48540 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
GdnfP48540 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.58□□□□□ -0.56
GdnfP48540 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.58□□□□□ -0.56
GdnfP48540 Gm14716-201ENSMUST00000120138 718 ntBASIC11.58□□□□□ -0.56
GdnfP48540 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Gm27989-201ENSMUST00000184721 107 ntBASIC11.58□□□□□ -0.56
GdnfP48540 Gm29741-201ENSMUST00000192667 421 ntBASIC11.58□□□□□ -0.56
GdnfP48540 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
GdnfP48540 Gm42660-201ENSMUST00000197733 947 ntBASIC11.58□□□□□ -0.56
GdnfP48540 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.58□□□□□ -0.56
GdnfP48540 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
GdnfP48540 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
GdnfP48540 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
GdnfP48540 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
GdnfP48540 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
GdnfP48540 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
GdnfP48540 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
GdnfP48540 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.57□□□□□ -0.56
GdnfP48540 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Gm4875-201ENSMUST00000118257 786 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
GdnfP48540 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.57□□□□□ -0.56
GdnfP48540 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.57□□□□□ -0.56
GdnfP48540 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.57□□□□□ -0.56
GdnfP48540 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
GdnfP48540 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.56□□□□□ -0.56
GdnfP48540 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
GdnfP48540 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms