Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.84□□□□□ -0.19
Rfx2P48379 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm10156-201ENSMUST00000122364 462 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.84□□□□□ -0.19
Rfx2P48379 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm37424-201ENSMUST00000191727 561 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.84□□□□□ -0.19
Rfx2P48379 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Rfx2P48379 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx2P48379 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx2P48379 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.19
Rfx2P48379 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Rfx2P48379 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx2P48379 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rfx2P48379 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx2P48379 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx2P48379 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.83□□□□□ -0.2
Rfx2P48379 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx2P48379 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Rfx2P48379 Gm11803-201ENSMUST00000119966 444 ntBASIC13.83□□□□□ -0.2
Rfx2P48379 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.83□□□□□ -0.2
Rfx2P48379 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.83□□□□□ -0.2
Rfx2P48379 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.83□□□□□ -0.2
Rfx2P48379 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Gm10478-201ENSMUST00000084451 396 ntBASIC13.83□□□□□ -0.2
Rfx2P48379 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx2P48379 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx2P48379 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx2P48379 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rfx2P48379 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx2P48379 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Gm8062-201ENSMUST00000139696 444 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.82□□□□□ -0.2
Rfx2P48379 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx2P48379 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx2P48379 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.82□□□□□ -0.2
Rfx2P48379 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.82□□□□□ -0.2
Rfx2P48379 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx2P48379 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx2P48379 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms