Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Mir698-201ENSMUST00000102164 109 ntBASIC13.61□□□□□ -0.23
Msh2P43247 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Gm42612-201ENSMUST00000197986 623 ntBASIC13.61□□□□□ -0.23
Msh2P43247 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Gm43170-201ENSMUST00000199827 612 ntBASIC13.61□□□□□ -0.23
Msh2P43247 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.61□□□□□ -0.23
Msh2P43247 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Gm17795-201ENSMUST00000214505 757 ntBASIC13.61□□□□□ -0.23
Msh2P43247 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.61□□□□□ -0.23
Msh2P43247 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Msh2P43247 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Msh2P43247 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Msh2P43247 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gm15240-201ENSMUST00000118156 720 ntBASIC13.6□□□□□ -0.23
Msh2P43247 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.6□□□□□ -0.23
Msh2P43247 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.6□□□□□ -0.23
Msh2P43247 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.6□□□□□ -0.23
Msh2P43247 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 Gm28760-201ENSMUST00000185995 736 ntBASIC13.6□□□□□ -0.23
Msh2P43247 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.6□□□□□ -0.23
Msh2P43247 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.6□□□□□ -0.23
Msh2P43247 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.6□□□□□ -0.23
Msh2P43247 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Msh2P43247 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Msh2P43247 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Msh2P43247 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Msh2P43247 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Msh2P43247 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.59□□□□□ -0.23
Msh2P43247 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.59□□□□□ -0.23
Msh2P43247 Gm7488-201ENSMUST00000117148 684 ntBASIC13.59□□□□□ -0.23
Msh2P43247 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Msh2P43247 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.59□□□□□ -0.23
Msh2P43247 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.59□□□□□ -0.23
Msh2P43247 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.59□□□□□ -0.23
Msh2P43247 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Msh2P43247 Gm24420-201ENSMUST00000176676 59 ntBASIC13.59□□□□□ -0.23
Msh2P43247 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms