Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.65□□□□□ -0.22
HttP42859 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.65□□□□□ -0.22
HttP42859 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.65□□□□□ -0.22
HttP42859 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.65□□□□□ -0.22
HttP42859 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.65□□□□□ -0.22
HttP42859 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HttP42859 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HttP42859 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
HttP42859 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HttP42859 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.64□□□□□ -0.23
HttP42859 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.64□□□□□ -0.23
HttP42859 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
HttP42859 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.64□□□□□ -0.23
HttP42859 Gm18463-201ENSMUST00000207258 474 ntBASIC13.64□□□□□ -0.23
HttP42859 Gm18460-201ENSMUST00000208088 464 ntBASIC13.64□□□□□ -0.23
HttP42859 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.64□□□□□ -0.23
HttP42859 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.64□□□□□ -0.23
HttP42859 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HttP42859 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Mir7677-201ENSMUST00000184226 67 ntBASIC13.64□□□□□ -0.23
HttP42859 Gm5100-201ENSMUST00000195631 589 ntBASIC13.64□□□□□ -0.23
HttP42859 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Gm12314-201ENSMUST00000118104 538 ntBASIC13.64□□□□□ -0.23
HttP42859 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Gm4726-201ENSMUST00000135604 736 ntBASIC13.64□□□□□ -0.23
HttP42859 Gm6019-201ENSMUST00000148369 736 ntBASIC13.64□□□□□ -0.23
HttP42859 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.64□□□□□ -0.23
HttP42859 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HttP42859 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HttP42859 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.64□□□□□ -0.23
HttP42859 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.63□□□□□ -0.23
HttP42859 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HttP42859 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.63□□□□□ -0.23
HttP42859 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HttP42859 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.63□□□□□ -0.23
HttP42859 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.63□□□□□ -0.23
HttP42859 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.63□□□□□ -0.23
HttP42859 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HttP42859 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HttP42859 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HttP42859 Gm23596-201ENSMUST00000104304 132 ntBASIC13.63□□□□□ -0.23
HttP42859 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.63□□□□□ -0.23
HttP42859 Gm4157-201ENSMUST00000211647 679 ntBASIC13.63□□□□□ -0.23
HttP42859 Gm5455-201ENSMUST00000058710 715 ntBASIC13.63□□□□□ -0.23
HttP42859 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HttP42859 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.63□□□□□ -0.23
HttP42859 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HttP42859 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HttP42859 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm12516-201ENSMUST00000120819 385 ntBASIC13.62□□□□□ -0.23
HttP42859 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms