Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Gm14928-201ENSMUST00000120198 477 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Gm12091-201ENSMUST00000146791 830 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cd9P40240 Proscos-202ENSMUST00000178990 666 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Gm28693-202ENSMUST00000190758 331 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.01□□□□□ -0.33
Cd9P40240 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd9P40240 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Gm10012-201ENSMUST00000078252 192 ntBASIC13.01□□□□□ -0.33
Cd9P40240 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd9P40240 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd9P40240 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd9P40240 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13□□□□□ -0.33
Cd9P40240 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Cd9P40240 Gm11618-201ENSMUST00000117946 267 ntBASIC13□□□□□ -0.33
Cd9P40240 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Cd9P40240 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13□□□□□ -0.33
Cd9P40240 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13□□□□□ -0.33
Cd9P40240 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Gm45779-201ENSMUST00000212189 4064 ntBASIC13□□□□□ -0.33
Cd9P40240 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cd9P40240 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cd9P40240 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cd9P40240 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.99□□□□□ -0.33
Cd9P40240 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.99□□□□□ -0.33
Cd9P40240 Gm12291-201ENSMUST00000121627 311 ntBASIC12.99□□□□□ -0.33
Cd9P40240 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd9P40240 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.99□□□□□ -0.33
Cd9P40240 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.99□□□□□ -0.33
Cd9P40240 Gm38671-201ENSMUST00000200573 130 ntBASIC12.99□□□□□ -0.33
Cd9P40240 Gm9908-201ENSMUST00000211534 448 ntBASIC12.99□□□□□ -0.33
Cd9P40240 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.99□□□□□ -0.33
Cd9P40240 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd9P40240 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms