Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.16□□□□□ -0.46
Nedd8P29595 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nedd8P29595 Gm29310-201ENSMUST00000185468 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21825-201ENSMUST00000185728 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm29109-201ENSMUST00000185895 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21896-201ENSMUST00000186520 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21873-201ENSMUST00000186728 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm17807-201ENSMUST00000186869 298 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21794-201ENSMUST00000187056 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21880-201ENSMUST00000187275 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21826-201ENSMUST00000187451 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21198-201ENSMUST00000188393 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21749-201ENSMUST00000189343 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21901-201ENSMUST00000189568 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm29424-201ENSMUST00000189716 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm28599-201ENSMUST00000189838 694 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21867-201ENSMUST00000189917 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm29269-201ENSMUST00000190087 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21722-201ENSMUST00000190153 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm28423-201ENSMUST00000190701 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21899-201ENSMUST00000190745 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21910-201ENSMUST00000191163 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21849-201ENSMUST00000191571 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm28678-201ENSMUST00000191593 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm20910-201ENSMUST00000193268 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm21871-201ENSMUST00000194621 696 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nedd8P29595 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.16□□□□□ -0.46
Nedd8P29595 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nedd8P29595 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.16□□□□□ -0.46
Nedd8P29595 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nedd8P29595 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nedd8P29595 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nedd8P29595 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.15□□□□□ -0.46
Nedd8P29595 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.15□□□□□ -0.46
Nedd8P29595 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nedd8P29595 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.15□□□□□ -0.46
Nedd8P29595 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.15□□□□□ -0.46
Nedd8P29595 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nedd8P29595 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.15□□□□□ -0.46
Nedd8P29595 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Nedd8P29595 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nedd8P29595 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.15□□□□□ -0.47
Nedd8P29595 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Nedd8P29595 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nedd8P29595 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Nedd8P29595 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nedd8P29595 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.14□□□□□ -0.47
Nedd8P29595 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.14□□□□□ -0.47
Nedd8P29595 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nedd8P29595 Daam2-202ENSMUST00000224595 1926 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nedd8P29595 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.14□□□□□ -0.47
Nedd8P29595 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Nedd8P29595 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nedd8P29595 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.14□□□□□ -0.47
Nedd8P29595 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 Gm5364-201ENSMUST00000216789 889 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.14□□□□□ -0.47
Nedd8P29595 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms