Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pde6bP23440 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pde6bP23440 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.43□□□□□ -0.1
Pde6bP23440 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.43□□□□□ -0.1
Pde6bP23440 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Pde6bP23440 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pde6bP23440 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.43□□□□□ -0.1
Pde6bP23440 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.43□□□□□ -0.1
Pde6bP23440 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Gm42627-201ENSMUST00000197347 224 ntBASIC14.43□□□□□ -0.1
Pde6bP23440 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.43□□□□□ -0.1
Pde6bP23440 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pde6bP23440 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pde6bP23440 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.43□□□□□ -0.1
Pde6bP23440 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Gm38266-201ENSMUST00000194931 421 ntBASIC14.42□□□□□ -0.1
Pde6bP23440 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.42□□□□□ -0.1
Pde6bP23440 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.42□□□□□ -0.1
Pde6bP23440 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pde6bP23440 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.42□□□□□ -0.1
Pde6bP23440 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.42□□□□□ -0.1
Pde6bP23440 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Snora73a-201ENSMUST00000082453 205 ntBASIC14.42□□□□□ -0.1
Pde6bP23440 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.42□□□□□ -0.1
Pde6bP23440 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pde6bP23440 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pde6bP23440 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pde6bP23440 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Gm22018-201ENSMUST00000104357 131 ntBASIC14.41□□□□□ -0.1
Pde6bP23440 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Gm14723-201ENSMUST00000118686 215 ntBASIC14.41□□□□□ -0.1
Pde6bP23440 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.41□□□□□ -0.1
Pde6bP23440 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pde6bP23440 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.41□□□□□ -0.1
Pde6bP23440 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.41□□□□□ -0.1
Pde6bP23440 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Gm10146-201ENSMUST00000072739 309 ntBASIC14.41□□□□□ -0.1
Pde6bP23440 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pde6bP23440 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms