Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
P01804 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.4□□□□□ -0.59
P01804 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P01804 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P01804 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P01804 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P01804 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P01804 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.39□□□□□ -0.59
P01804 Gm8213-201ENSMUST00000118191 441 ntBASIC11.39□□□□□ -0.59
P01804 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.39□□□□□ -0.59
P01804 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.39□□□□□ -0.59
P01804 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.39□□□□□ -0.59
P01804 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P01804 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.39□□□□□ -0.59
P01804 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.39□□□□□ -0.59
P01804 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P01804 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Mir7221-201ENSMUST00000184009 72 ntBASIC11.39□□□□□ -0.59
P01804 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.39□□□□□ -0.59
P01804 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.39□□□□□ -0.59
P01804 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.39□□□□□ -0.59
P01804 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P01804 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.39□□□□□ -0.59
P01804 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.39□□□□□ -0.59
P01804 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.39□□□□□ -0.59
P01804 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P01804 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01804 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.39□□□□□ -0.59
P01804 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.38□□□□□ -0.59
P01804 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.38□□□□□ -0.59
P01804 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.38□□□□□ -0.59
P01804 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P01804 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
P01804 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Gm14350-201ENSMUST00000116642 640 ntBASIC11.38□□□□□ -0.59
P01804 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.38□□□□□ -0.59
P01804 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P01804 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.38□□□□□ -0.59
P01804 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.38□□□□□ -0.59
P01804 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P01804 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01804 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01804 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.37□□□□□ -0.59
P01804 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01804 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P01804 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms