Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chrna4O70174 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.32□□□□□ -0.28
Chrna4O70174 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.32□□□□□ -0.28
Chrna4O70174 Gm9794-201ENSMUST00000202370 423 ntBASIC13.32□□□□□ -0.28
Chrna4O70174 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.32□□□□□ -0.28
Chrna4O70174 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chrna4O70174 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chrna4O70174 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna4O70174 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.32□□□□□ -0.28
Chrna4O70174 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chrna4O70174 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna4O70174 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chrna4O70174 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Gm12490-201ENSMUST00000120255 560 ntBASIC13.31□□□□□ -0.28
Chrna4O70174 Gm7063-201ENSMUST00000186840 981 ntBASIC13.31□□□□□ -0.28
Chrna4O70174 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna4O70174 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna4O70174 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna4O70174 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.31□□□□□ -0.28
Chrna4O70174 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna4O70174 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Chrna4O70174 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna4O70174 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chrna4O70174 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.31□□□□□ -0.28
Chrna4O70174 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna4O70174 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chrna4O70174 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna4O70174 Gm8598-201ENSMUST00000221184 836 ntBASIC13.3□□□□□ -0.28
Chrna4O70174 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.3□□□□□ -0.28
Chrna4O70174 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna4O70174 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chrna4O70174 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Chrna4O70174 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chrna4O70174 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.29□□□□□ -0.28
Chrna4O70174 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna4O70174 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna4O70174 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna4O70174 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna4O70174 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chrna4O70174 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chrna4O70174 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.29□□□□□ -0.28
Chrna4O70174 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms