Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Mir686-201ENSMUST00000102174 109 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm5187-201ENSMUST00000117317 991 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm12363-201ENSMUST00000122250 668 ntBASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Gm26185-201ENSMUST00000157692 266 ntBASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb9E9Q5G2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm12742-201ENSMUST00000117326 410 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm25261-201ENSMUST00000157416 134 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm37042-201ENSMUST00000193816 581 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm4768-201ENSMUST00000206199 686 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm19163-201ENSMUST00000223313 780 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb9E9Q5G2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms