Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gm1335-201ENSMUST00000121653 386 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh17E9PXF0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm15198-201ENSMUST00000117283 177 ntBASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm37922-201ENSMUST00000195596 455 ntBASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm37497-201ENSMUST00000195830 798 ntBASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh17E9PXF0 Gm18054-201ENSMUST00000207539 555 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms