Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc112A0AUP1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc112A0AUP1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.08■□□□□ 0
Ccdc112A0AUP1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.08■□□□□ 0
Ccdc112A0AUP1 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.08■□□□□ 0
Ccdc112A0AUP1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.08■□□□□ 0
Ccdc112A0AUP1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc112A0AUP1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.07■□□□□ 0
Ccdc112A0AUP1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc112A0AUP1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 190.3 ms