Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.83□□□□□ -0.68
Trav18A0A075B656 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.83□□□□□ -0.68
Trav18A0A075B656 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm29608-201ENSMUST00000190444 463 ntBASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.83□□□□□ -0.68
Trav18A0A075B656 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav18A0A075B656 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.82□□□□□ -0.68
Trav18A0A075B656 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.82□□□□□ -0.68
Trav18A0A075B656 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm5161-201ENSMUST00000075243 853 ntBASIC10.82□□□□□ -0.68
Trav18A0A075B656 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.82□□□□□ -0.68
Trav18A0A075B656 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav18A0A075B656 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav18A0A075B656 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.81□□□□□ -0.68
Trav18A0A075B656 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms