Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.16□□□□□ -0.78
PdfS4R2K0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PdfS4R2K0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
PdfS4R2K0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm15693-201ENSMUST00000120470 637 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm44608-201ENSMUST00000206827 855 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.15□□□□□ -0.78
PdfS4R2K0 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.15□□□□□ -0.78
PdfS4R2K0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.15□□□□□ -0.78
PdfS4R2K0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PdfS4R2K0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
PdfS4R2K0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PdfS4R2K0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PdfS4R2K0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
PdfS4R2K0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.14□□□□□ -0.79
PdfS4R2K0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm27920-201ENSMUST00000183953 96 ntBASIC10.14□□□□□ -0.79
PdfS4R2K0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.14□□□□□ -0.79
PdfS4R2K0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
PdfS4R2K0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
PdfS4R2K0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PdfS4R2K0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms