Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcb1Q9Z0H3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm12363-201ENSMUST00000122250 668 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcb1Q9Z0H3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Gm27501-201ENSMUST00000183599 107 ntBASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcb1Q9Z0H3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms