Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Auts2-212ENSMUST00000178555 309 ntBASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chaf1aQ9QWF0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chaf1aQ9QWF0 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.83□□□□□ -0.03
Chaf1aQ9QWF0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Gm7063-201ENSMUST00000186840 981 ntBASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chaf1aQ9QWF0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm44872-201ENSMUST00000207864 420 ntBASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chaf1aQ9QWF0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms