Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm16202-201ENSMUST00000117532 544 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm17794-201ENSMUST00000220252 955 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ldb3Q9JKS4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm11478-201ENSMUST00000117851 599 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm8213-201ENSMUST00000118191 441 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm11803-201ENSMUST00000119966 444 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm10156-201ENSMUST00000122364 462 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm19931-201ENSMUST00000198920 368 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm10012-201ENSMUST00000078252 192 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ldb3Q9JKS4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ldb3Q9JKS4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms