Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm9727-201ENSMUST00000161387 555 ntBASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim42Q9D2H5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim42Q9D2H5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim42Q9D2H5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms