Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Snf8Q9CZ28 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm22175-201ENSMUST00000175007 78 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snf8Q9CZ28 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.61□□□□□ -0.23
Snf8Q9CZ28 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Snf8Q9CZ28 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms