Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim13Q9CYB0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gm21470-201ENSMUST00000187680 696 ntBASIC12.22□□□□□ -0.45
Trim13Q9CYB0 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim13Q9CYB0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Mir874-201ENSMUST00000104769 76 ntBASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Gm15460-201ENSMUST00000118147 391 ntBASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim13Q9CYB0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim13Q9CYB0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim13Q9CYB0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms