Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm28760-201ENSMUST00000185995 736 ntBASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
H2afb1Q9CQ70 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm5354-201ENSMUST00000182417 973 ntBASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
H2afb1Q9CQ70 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm15321-201ENSMUST00000121290 288 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm12151-201ENSMUST00000121374 290 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm15376-201ENSMUST00000122258 783 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm42550-201ENSMUST00000201553 960 ntBASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
H2afb1Q9CQ70 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms