Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Gm18889-201ENSMUST00000174284 929 ntBASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Gm2756-201ENSMUST00000195851 400 ntBASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Krt88Q9CPR6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Gm6912-201ENSMUST00000117218 544 ntBASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Krt88Q9CPR6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm24543-201ENSMUST00000103867 82 ntBASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm27494-201ENSMUST00000184735 189 ntBASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt88Q9CPR6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms