Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm28324-201ENSMUST00000187913 264 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 AY036118-201ENSMUST00000200021 923 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Mir483-201ENSMUST00000093631 73 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gm4862-201ENSMUST00000170405 438 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Mir6923-201ENSMUST00000184592 72 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gm1821-202ENSMUST00000227415 750 ntBASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdh23Q99PF4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm44329-201ENSMUST00000197469 112 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm15573-201ENSMUST00000119487 540 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm28388-201ENSMUST00000186262 437 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh23Q99PF4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm13937-201ENSMUST00000121000 988 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Mt1-202ENSMUST00000211807 1085 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm9111-201ENSMUST00000219394 709 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm12948-201ENSMUST00000119406 682 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms