Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm24830-201ENSMUST00000102024 166 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm25890-201ENSMUST00000177643 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm22614-201ENSMUST00000178300 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm22042-201ENSMUST00000082989 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm26232-201ENSMUST00000083360 166 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm24136-201ENSMUST00000083374 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Gm26110-201ENSMUST00000083971 165 ntBASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cstf1Q99LC2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Mir5120-201ENSMUST00000175020 78 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm2260-201ENSMUST00000184965 657 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm18212-201ENSMUST00000211678 889 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Gm19208-201ENSMUST00000213861 912 ntBASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.21□□□□□ -0.29
Cstf1Q99LC2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cstf1Q99LC2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms