Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmp1Q99KU0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmp1Q99KU0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Gm27772-201ENSMUST00000184900 187 ntBASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.77□□□□□ -0.37
Vmp1Q99KU0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmp1Q99KU0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms