Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb22Q91XZ8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm27847-201ENSMUST00000183711 107 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm27375-201ENSMUST00000183799 107 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm7561-201ENSMUST00000211203 886 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb22Q91XZ8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Gm13123-201ENSMUST00000122173 492 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Gm37922-201ENSMUST00000195596 455 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC15.42■□□□□ 0.06
Pcdhb22Q91XZ8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Gm12203-201ENSMUST00000118235 598 ntBASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Gm12209-201ENSMUST00000120089 596 ntBASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Gm22331-201ENSMUST00000158066 136 ntBASIC15.41■□□□□ 0.06
Pcdhb22Q91XZ8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms