Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb6Q91XZ4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb6Q91XZ4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb6Q91XZ4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm12091-201ENSMUST00000146791 830 ntBASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb6Q91XZ4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm23984-201ENSMUST00000157139 203 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm44069-201ENSMUST00000204898 506 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm45384-201ENSMUST00000210451 277 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb6Q91XZ4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Gm13612-201ENSMUST00000119276 390 ntBASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Gm9908-201ENSMUST00000211534 448 ntBASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb6Q91XZ4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms