Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.06□□□□□ -0.32
Vsx1Q91V10 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vsx1Q91V10 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm24830-201ENSMUST00000102024 166 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm8805-201ENSMUST00000117848 313 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm25890-201ENSMUST00000177643 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm22614-201ENSMUST00000178300 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm5523-201ENSMUST00000180415 997 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm42997-202ENSMUST00000200321 985 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm43947-201ENSMUST00000203019 959 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm22042-201ENSMUST00000082989 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm26232-201ENSMUST00000083360 166 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm24136-201ENSMUST00000083374 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm26110-201ENSMUST00000083971 165 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.05□□□□□ -0.32
Vsx1Q91V10 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vsx1Q91V10 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms