Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.32■□□□□ 0.04
StrcQ8VIM6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
StrcQ8VIM6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm22144-201ENSMUST00000157402 102 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm22133-201ENSMUST00000102082 109 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Mir7076-201ENSMUST00000183519 74 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm43520-201ENSMUST00000197996 164 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.31■□□□□ 0.04
StrcQ8VIM6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
StrcQ8VIM6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Gm23596-201ENSMUST00000104304 132 ntBASIC15.3■□□□□ 0.04
StrcQ8VIM6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Snora73b-201ENSMUST00000083419 205 ntBASIC15.3■□□□□ 0.04
StrcQ8VIM6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
StrcQ8VIM6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Gm13809-201ENSMUST00000117921 597 ntBASIC15.29■□□□□ 0.04
StrcQ8VIM6 Mir1901-201ENSMUST00000122616 78 ntBASIC15.29■□□□□ 0.04
StrcQ8VIM6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.29■□□□□ 0.04
StrcQ8VIM6 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.29■□□□□ 0.04
StrcQ8VIM6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.29■□□□□ 0.04
StrcQ8VIM6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.29■□□□□ 0.04
StrcQ8VIM6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
StrcQ8VIM6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms