Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.68□□□□□ -0.22
Trim60Q8VI40 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim60Q8VI40 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Auts2-212ENSMUST00000178555 309 ntBASIC13.67□□□□□ -0.22
Trim60Q8VI40 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.67□□□□□ -0.22
Trim60Q8VI40 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim60Q8VI40 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms