Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm21156-201ENSMUST00000189693 869 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rpa1Q8VEE4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Gm5566-201ENSMUST00000116118 459 ntBASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Gm11594-201ENSMUST00000122313 162 ntBASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpa1Q8VEE4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rpa1Q8VEE4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rpa1Q8VEE4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm25911-201ENSMUST00000157621 56 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm9719-201ENSMUST00000162765 543 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm24513-201ENSMUST00000174964 138 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm27397-201ENSMUST00000184997 107 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm37935-201ENSMUST00000192012 982 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Dupd1-202ENSMUST00000224735 548 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms