Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Gm46209-201ENSMUST00000217912 553 ntBASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd3Q8R1N4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm8410-201ENSMUST00000117225 605 ntBASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm12585-201ENSMUST00000117307 290 ntBASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm5779-201ENSMUST00000218467 910 ntBASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd3Q8R1N4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Nudcd3Q8R1N4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm6415-201ENSMUST00000118488 348 ntBASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd3Q8R1N4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms