Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sf3a1Q8K4Z5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sf3a1Q8K4Z5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm11814-201ENSMUST00000119515 929 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Proscos-202ENSMUST00000178990 666 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Mir7221-201ENSMUST00000184009 72 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sf3a1Q8K4Z5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Sf3a1Q8K4Z5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms