Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.35□□□□□ -0.27
Clip4Q8CI96 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Gm27772-201ENSMUST00000184900 187 ntBASIC13.34□□□□□ -0.27
Clip4Q8CI96 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.34□□□□□ -0.27
Clip4Q8CI96 Gm9908-201ENSMUST00000211534 448 ntBASIC13.34□□□□□ -0.27
Clip4Q8CI96 Gm7653-201ENSMUST00000214567 508 ntBASIC13.34□□□□□ -0.27
Clip4Q8CI96 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clip4Q8CI96 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clip4Q8CI96 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clip4Q8CI96 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clip4Q8CI96 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clip4Q8CI96 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clip4Q8CI96 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.33□□□□□ -0.28
Clip4Q8CI96 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip4Q8CI96 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.33□□□□□ -0.28
Clip4Q8CI96 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.32□□□□□ -0.28
Clip4Q8CI96 Gm43094-201ENSMUST00000196549 921 ntBASIC13.32□□□□□ -0.28
Clip4Q8CI96 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms