Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.8□□□□□ -0.52
ShfQ8CG80 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.8□□□□□ -0.52
ShfQ8CG80 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
ShfQ8CG80 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
ShfQ8CG80 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.8□□□□□ -0.52
ShfQ8CG80 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.79□□□□□ -0.52
ShfQ8CG80 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ShfQ8CG80 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.79□□□□□ -0.52
ShfQ8CG80 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Gm20445-201ENSMUST00000061905 565 ntBASIC11.79□□□□□ -0.52
ShfQ8CG80 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ShfQ8CG80 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.78□□□□□ -0.52
ShfQ8CG80 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.78□□□□□ -0.52
ShfQ8CG80 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.78□□□□□ -0.52
ShfQ8CG80 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.78□□□□□ -0.52
ShfQ8CG80 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.78□□□□□ -0.52
ShfQ8CG80 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ShfQ8CG80 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.78□□□□□ -0.52
ShfQ8CG80 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms