Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc87Q8CDL9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm12585-201ENSMUST00000117307 290 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm24694-201ENSMUST00000180054 110 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm27663-201ENSMUST00000184839 110 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm2423-201ENSMUST00000074863 733 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc87Q8CDL9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gm6912-201ENSMUST00000117218 544 ntBASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gm9522-201ENSMUST00000182394 926 ntBASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gm45841-201ENSMUST00000207700 164 ntBASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc87Q8CDL9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm15321-201ENSMUST00000121290 288 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm10766-202ENSMUST00000194123 606 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm5425-201ENSMUST00000214125 459 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms