Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.25□□□□□ -0.45
Pif1Q80SX8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.25□□□□□ -0.45
Pif1Q80SX8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Gm43118-201ENSMUST00000199149 775 ntBASIC12.25□□□□□ -0.45
Pif1Q80SX8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.25□□□□□ -0.45
Pif1Q80SX8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pif1Q80SX8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.25□□□□□ -0.45
Pif1Q80SX8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pif1Q80SX8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm13350-201ENSMUST00000120519 479 ntBASIC12.24□□□□□ -0.45
Pif1Q80SX8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.24□□□□□ -0.45
Pif1Q80SX8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm44364-201ENSMUST00000198368 141 ntBASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gm18935-201ENSMUST00000212692 664 ntBASIC12.24□□□□□ -0.45
Pif1Q80SX8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.24□□□□□ -0.45
Pif1Q80SX8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pif1Q80SX8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms