Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Scaf4Q6PFF0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scaf4Q6PFF0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms