Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf220Q6PDX6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf220Q6PDX6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf220Q6PDX6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm2810-201ENSMUST00000118681 990 ntBASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm12260-201ENSMUST00000122447 411 ntBASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm25927-201ENSMUST00000175058 117 ntBASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf220Q6PDX6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf220Q6PDX6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms