Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gm6447-201ENSMUST00000118905 835 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gm27437-201ENSMUST00000183429 107 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gm10576-201ENSMUST00000191927 825 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gm38223-201ENSMUST00000194484 695 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sp140Q6NSQ5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm12859-201ENSMUST00000117834 427 ntBASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Mir6977-201ENSMUST00000184960 64 ntBASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm18307-201ENSMUST00000206864 949 ntBASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sp140Q6NSQ5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 173.6 ms