Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm8805-201ENSMUST00000117848 313 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm43630-201ENSMUST00000201550 776 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.59■□□□□ 0.09
Ctr9Q62018 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm10146-201ENSMUST00000072739 309 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.59■□□□□ 0.09
Ctr9Q62018 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ctr9Q62018 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.58■□□□□ 0.09
Ctr9Q62018 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ctr9Q62018 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ctr9Q62018 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.58■□□□□ 0.09
Ctr9Q62018 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ctr9Q62018 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Ctr9Q62018 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm1335-201ENSMUST00000121653 386 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.58■□□□□ 0.08
Ctr9Q62018 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.58■□□□□ 0.08
Ctr9Q62018 Acot6-202ENSMUST00000222921 3622 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.58■□□□□ 0.08
Ctr9Q62018 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ctr9Q62018 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm12742-201ENSMUST00000117326 410 ntBASIC15.57■□□□□ 0.08
Ctr9Q62018 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm7029-201ENSMUST00000173226 450 ntBASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm45841-201ENSMUST00000207700 164 ntBASIC15.57■□□□□ 0.08
Ctr9Q62018 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.57■□□□□ 0.08
Ctr9Q62018 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ctr9Q62018 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ctr9Q62018 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms