Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gli3Q61602 Gm2875-201ENSMUST00000211333 360 ntBASIC17.34■□□□□ 0.37
Gli3Q61602 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.34■□□□□ 0.37
Gli3Q61602 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gli3Q61602 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gli3Q61602 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.33■□□□□ 0.37
Gli3Q61602 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Mir181d-201ENSMUST00000102383 72 ntBASIC17.33■□□□□ 0.37
Gli3Q61602 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.33■□□□□ 0.37
Gli3Q61602 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gli3Q61602 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Gli3Q61602 Gm7959-201ENSMUST00000221823 1078 ntBASIC17.33■□□□□ 0.37
Gli3Q61602 Gm5455-201ENSMUST00000058710 715 ntBASIC17.33■□□□□ 0.37
Gli3Q61602 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli3Q61602 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli3Q61602 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli3Q61602 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli3Q61602 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gli3Q61602 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gli3Q61602 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
Gli3Q61602 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm13916-201ENSMUST00000117368 628 ntBASIC17.32■□□□□ 0.36
Gli3Q61602 Gm12783-201ENSMUST00000121425 397 ntBASIC17.32■□□□□ 0.36
Gli3Q61602 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm17798-201ENSMUST00000182282 1035 ntBASIC17.32■□□□□ 0.36
Gli3Q61602 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm43184-201ENSMUST00000197247 542 ntBASIC17.32■□□□□ 0.36
Gli3Q61602 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC17.32■□□□□ 0.36
Gli3Q61602 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.32■□□□□ 0.36
Gli3Q61602 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Gli3Q61602 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC17.32■□□□□ 0.36
Gli3Q61602 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Gm26448-201ENSMUST00000082446 203 ntBASIC17.32■□□□□ 0.36
Gli3Q61602 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gli3Q61602 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gli3Q61602 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gli3Q61602 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Gli3Q61602 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC17.31■□□□□ 0.36
Gli3Q61602 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC17.31■□□□□ 0.36
Gli3Q61602 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC17.31■□□□□ 0.36
Gli3Q61602 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Gm4604-201ENSMUST00000025040 390 ntBASIC17.31■□□□□ 0.36
Gli3Q61602 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gli3Q61602 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.3■□□□□ 0.36
Gli3Q61602 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.3■□□□□ 0.36
Gli3Q61602 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms