Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gm28693-202ENSMUST00000190758 331 ntBASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps54Q5SPW0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Gm1335-201ENSMUST00000121653 386 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Gm16479-201ENSMUST00000121706 932 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vps54Q5SPW0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vps54Q5SPW0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps54Q5SPW0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps54Q5SPW0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps54Q5SPW0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps54Q5SPW0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Gm6458-201ENSMUST00000211573 635 ntBASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms