Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3aQ3ULJ3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Gm12997-201ENSMUST00000120207 640 ntBASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Upf3aQ3ULJ3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Mir7070-201ENSMUST00000183657 86 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Upf3aQ3ULJ3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Upf3aQ3ULJ3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms