Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm15240-201ENSMUST00000118156 720 ntBASIC14.03□□□□□ -0.16
Trim43aQ3TL54 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm27680-201ENSMUST00000184192 160 ntBASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43aQ3TL54 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.02□□□□□ -0.16
Trim43aQ3TL54 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43aQ3TL54 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.02□□□□□ -0.16
Trim43aQ3TL54 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.02□□□□□ -0.17
Trim43aQ3TL54 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm17330-201ENSMUST00000221047 165 ntBASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm6888-201ENSMUST00000221983 706 ntBASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trim43aQ3TL54 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Gm13223-201ENSMUST00000118609 747 ntBASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms