Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
SgcaP82350 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
SgcaP82350 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Gm15427-201ENSMUST00000117288 531 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcaP82350 Gm14140-201ENSMUST00000119999 995 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.08□□□□□ -0.64
SgcaP82350 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SgcaP82350 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SgcaP82350 Mir125a-201ENSMUST00000083545 68 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Mir497b-201ENSMUST00000093601 125 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.08□□□□□ -0.64
SgcaP82350 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SgcaP82350 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SgcaP82350 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SgcaP82350 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SgcaP82350 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.07□□□□□ -0.64
SgcaP82350 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.07□□□□□ -0.64
SgcaP82350 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SgcaP82350 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SgcaP82350 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.07□□□□□ -0.64
SgcaP82350 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcaP82350 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcaP82350 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SgcaP82350 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms