Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hmgb1P63158 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.59□□□□□ -0.07
Hmgb1P63158 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Hmgb1P63158 Gm14719-201ENSMUST00000121891 340 ntBASIC14.59□□□□□ -0.07
Hmgb1P63158 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Hmgb1P63158 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.59□□□□□ -0.07
Hmgb1P63158 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.59□□□□□ -0.07
Hmgb1P63158 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb1P63158 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.59□□□□□ -0.07
Hmgb1P63158 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb1P63158 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Hmgb1P63158 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hmgb1P63158 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hmgb1P63158 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Hmgb1P63158 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmgb1P63158 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm28760-201ENSMUST00000185995 736 ntBASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.58□□□□□ -0.08
Hmgb1P63158 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.58□□□□□ -0.08
Hmgb1P63158 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hmgb1P63158 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.57□□□□□ -0.08
Hmgb1P63158 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm12151-201ENSMUST00000121374 290 ntBASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm19931-201ENSMUST00000198920 368 ntBASIC14.57□□□□□ -0.08
Hmgb1P63158 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hmgb1P63158 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hmgb1P63158 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.56□□□□□ -0.08
Hmgb1P63158 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.56□□□□□ -0.08
Hmgb1P63158 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm15376-201ENSMUST00000122258 783 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms