Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup43P59235 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nup43P59235 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nup43P59235 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.5□□□□□ -0.41
Nup43P59235 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nup43P59235 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup43P59235 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Nup43P59235 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.49□□□□□ -0.41
Nup43P59235 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.49□□□□□ -0.41
Nup43P59235 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Gm14350-201ENSMUST00000116642 640 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Gm5035-201ENSMUST00000215581 927 ntBASIC12.49□□□□□ -0.41
Nup43P59235 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup43P59235 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Nup43P59235 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup43P59235 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup43P59235 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.48□□□□□ -0.41
Nup43P59235 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.48□□□□□ -0.41
Nup43P59235 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup43P59235 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Nup43P59235 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Gm27486-201ENSMUST00000184923 80 ntBASIC12.48□□□□□ -0.41
Nup43P59235 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.48□□□□□ -0.41
Nup43P59235 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.48□□□□□ -0.41
Nup43P59235 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.48□□□□□ -0.41
Nup43P59235 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.48□□□□□ -0.41
Nup43P59235 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Nup43P59235 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup43P59235 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.47□□□□□ -0.41
Nup43P59235 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.47□□□□□ -0.41
Nup43P59235 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms