Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Gm5356-201ENSMUST00000093326 615 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.08□□□□□ -0.32
Pdx1P52946 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdx1P52946 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdx1P52946 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Gm9002-201ENSMUST00000178437 499 ntBASIC13.07□□□□□ -0.32
Pdx1P52946 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.07□□□□□ -0.32
Pdx1P52946 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.07□□□□□ -0.32
Pdx1P52946 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.07□□□□□ -0.32
Pdx1P52946 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.07□□□□□ -0.32
Pdx1P52946 Gm5035-201ENSMUST00000215581 927 ntBASIC13.07□□□□□ -0.32
Pdx1P52946 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.07□□□□□ -0.32
Pdx1P52946 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdx1P52946 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.07□□□□□ -0.32
Pdx1P52946 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Pdx1P52946 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdx1P52946 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdx1P52946 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.06□□□□□ -0.32
Pdx1P52946 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pdx1P52946 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdx1P52946 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdx1P52946 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.06□□□□□ -0.32
Pdx1P52946 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Proscos-202ENSMUST00000178990 666 ntBASIC13.06□□□□□ -0.32
Pdx1P52946 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.06□□□□□ -0.32
Pdx1P52946 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.06□□□□□ -0.32
Pdx1P52946 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.06□□□□□ -0.32
Pdx1P52946 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdx1P52946 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdx1P52946 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdx1P52946 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms