Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Gm12485-201ENSMUST00000119641 291 ntBASIC12.78□□□□□ -0.36
Tnfsf4P43488 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.78□□□□□ -0.36
Tnfsf4P43488 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.78□□□□□ -0.36
Tnfsf4P43488 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.78□□□□□ -0.36
Tnfsf4P43488 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf4P43488 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf4P43488 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf4P43488 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Tnfsf4P43488 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf4P43488 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf4P43488 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf4P43488 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm9522-201ENSMUST00000182394 926 ntBASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm38144-201ENSMUST00000192790 465 ntBASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.77□□□□□ -0.37
Tnfsf4P43488 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.77□□□□□ -0.37
Tnfsf4P43488 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.77□□□□□ -0.37
Tnfsf4P43488 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf4P43488 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.76□□□□□ -0.37
Tnfsf4P43488 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf4P43488 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms